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biomedical-scientist/references/ai-skills.md
2026-08-14 17:08:48 +02:00

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External AI agent skills — biomedical-scientist

Proven, publicly available AI agent skills mapped to this occupation. Nothing is copied from the sources: every entry is a name, a one-line summary and a link to the upstream skill package. Each section names its source repository, commit, license and retrieval date.

Tiers: core = the skill directly exercises a top market hard skill, tool or method (from gated job-ad evidence) or an essential ESCO competence of this occupation; adjacent = plausibly useful, secondary. Entries are capped at 12 per source and 80 in total per occupation (core first, strongest matches survive); everything beyond the caps is excluded and logged in the pipeline audit trail, not in this package.

Matched deterministically (ISCO group + title/competence keywords, tiered against market evidence + ESCO essentials) by pipeline/p5_enrich_ai_skills.py on 2026-07-14.

Source: anthropics/skills

  • Repository: https://github.com/anthropics/skills (commit f6656c1, retrieved 2026-07-14)
  • License: Apache-2.0; the document skills (docx/pdf/pptx/xlsx) are source-available — see the LICENSE.txt in the upstream skill folder
Skill Tier What it adds Upstream
docx adjacent Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files) or Word templates (.dotx files). Triggers include: any mention of 'Word doc', 'word document', '.docx', '.dotx', or requests to … source
pdf adjacent Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating … source

Source: a5c-ai/babysitter

Skill Tier What it adds Upstream
population-health-stratification core Stratify patient populations by risk level using claims data, clinical data, and social determinants to prioritize care management interventions source
health-data-integration core Facilitate interoperability between health IT systems including EHR, HIE, and clinical decision support through HL7, FHIR, and other healthcare data standards source
medical-agent core Build medical AI agents for clinical decision support, medical record summarization, diagnostic assistance, and healthcare workflow automation. source
clinical-workflow-analysis core Analyze clinical workflows to identify inefficiencies, bottlenecks, and improvement opportunities using Lean healthcare principles and value stream mapping techniques source
bioethics-deliberation core Apply bioethical principles (autonomy, beneficence, non-maleficence, justice) and case-based reasoning to healthcare decisions, research protocols, and clinical dilemmas source
iso-standards-compliance-checker core Medical device standards compliance verification skill for ISO 13485, ISO 14971, IEC 62304, IEC 60601, and related standards source
image-algorithm-validator core Medical image processing algorithm validation skill for segmentation, detection, and analysis algorithms source
iso14971-risk-analyzer core Comprehensive risk management skill implementing ISO 14971:2019 methodology for medical device risk analysis source
extractables-leachables-analyzer core E&L study design and data analysis skill for chemical characterization of medical devices source
statistical-testing core Apply statistical hypothesis testing, significance analysis, A/B test evaluation, and distribution comparisons for data science workflows. source

Source: AgriciDaniel/claude-blog

Skill Tier What it adds Upstream
blog-audit core Full-site blog health assessment scanning all blog files for quality scores, orphan pages, topic cannibalization, stale content, and AI citation readiness. Spawns parallel subagents for comprehensive analysis. Produces per-post scores and … source

Source: AgriciDaniel/claude-seo

Skill Tier What it adds Upstream
seo-local core Local SEO analysis covering Google Business Profile optimization, NAP consistency, citation health, review signals, local schema markup, location page quality, multi-location SEO, and industry-specific recommendations. Detects business … source

Source: alirezarezvani/claude-skills

Skill Tier What it adds Upstream
quality-documentation-manager core Document control system management for medical device QMS. Covers document numbering, version control, change management, and 21 CFR Part 11 compliance. Use when working on document control procedures, change control workflows, document … source
quality-manager-qms-iso13485 core ISO 13485 Quality Management System implementation and maintenance for medical device organizations. Provides QMS design, documentation control, internal auditing, CAPA management, and certification support. Use when working with medical … source
risk-management-specialist core Medical device risk management specialist implementing ISO 14971 throughout product lifecycle. Provides risk analysis, risk evaluation, risk control, and post-production information analysis. Use when user mentions risk management, ISO … source
capa-officer core CAPA system management for medical device QMS. Covers root cause analysis, corrective action planning, effectiveness verification, and CAPA metrics. Use when running CAPA investigations, 5-Why analysis, fishbone diagrams, root cause … source
fda-consultant-specialist core FDA regulatory consultant for medical device companies. Provides 510(k)/PMA/De Novo pathway guidance, QMSR (21 CFR 820, which incorporates ISO 13485:2016 by reference since 2026-02-02; formerly QSR) compliance, HIPAA assessments, and … source

Source: brycewang-stanford/Auto-Empirical-Research-Skills

Skill Tier What it adds Upstream
biomedical-skills core 24 biomedical research skills. Trigger: medical research, clinical trials, genomics, bioinformatics. Design: domain databases, wet-lab/dry-lab methods, and ethical compliance guides. source
medical-data-api core Access FDA drug data and WHO global health statistics for research source
doctor core System diagnostics and health checks for Diverga plugin. OpenClaw-style Check-Report-Fix pattern with 5-layer diagnostics. Triggers: /diverga:doctor, diverga doctor, system check, diagnose, 진단 source
epidemiology-guide core Epidemiological study designs, measures of association, and public health ana... source
numerical-methods-guide core Apply numerical methods and scientific computing techniques source
medical-imaging-guide core Medical image analysis with deep learning for research applications source
econometrics-skills core 12 econometrics skills. Trigger: causal analysis, regression models, treatment effects, panel data. Design: method-centric guides with R/Python code and diagnostic tests. source
lifelines core Complete survival analysis library in Python. Handles right-censored data, Kaplan-Meier curves, and Cox regression. Standard for clinical trial analysis and epidemiology. source
med-researcher-r1-guide core Medical deep research agent with reasoning chain analysis source
clinical-research-guide core Design clinical studies and report using CONSORT, STROBE guidelines source
law-skills core 9 legal research skills. Trigger: legal research, case law analysis, regulatory compliance. Design: legal databases, citation networks, and judicial analytics tools. source

Source: davila7/claude-code-templates

Skill Tier What it adds Upstream
treatment-plans core Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, … source
clinical-reports core Write comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full … source
mdr-745-specialist core EU MDR 2017/745 regulation specialist and consultant for medical device requirement management. Provides comprehensive MDR compliance expertise, gap analysis, technical documentation guidance, clinical evidence requirements, and … source
biomni core Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use this skill when conducting multi-step biomedical research including CRISPR … source
quality-manager-qms-iso13485 core ISO 13485 Quality Management System specialist for medical device companies. Provides QMS implementation, maintenance, process optimization, and compliance expertise. Use for QMS design, documentation control, management review, internal … source
datacommons-client core Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public … source
risk-management-specialist core Senior Risk Management specialist for medical device companies implementing ISO 14971 risk management throughout product lifecycle. Provides risk analysis, risk evaluation, risk control, and post-production information analysis. Use for … source
fda-consultant-specialist core Senior FDA consultant and specialist for medical device companies including HIPAA compliance and requirement management. Provides FDA pathway expertise, QSR compliance, cybersecurity guidance, and regulatory submission support. Use for FDA … source
histolab core Digital pathology image processing toolkit for whole slide images (WSI). Use this skill when working with histopathology slides, processing H&E or IHC stained tissue images, extracting tiles from gigapixel pathology images, detecting … source
exploratory-data-analysis core Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. … source
adaptyv core Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or … source
pylabrobot core Laboratory automation toolkit for controlling liquid handlers, plate readers, pumps, heater shakers, incubators, centrifuges, and analytical equipment. Use this skill when automating laboratory workflows, programming liquid handling robots … source

Source: foryourhealth111-pixel/Vibe-Skills

Skill Tier What it adds Upstream
treatment-plans core Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, … source
clinical-reports core Write comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full … source
iso-13485-certification core Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO 13485 QMS documentation, including (1) conducting gap analysis of existing … source
exploratory-data-analysis core Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. … source
adaptyv core Cloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or … source

Source: infrasity-labs/dev-gtm-claude-skills

Skill Tier What it adds Upstream
seo-local core Local SEO analysis covering Google Business Profile optimization, NAP consistency, citation health, review signals, local schema markup, location page quality, multi-location SEO, and industry-specific recommendations. Detects business … source
blog-audit core Full-site blog health assessment scanning all blog files for quality scores, orphan pages, topic cannibalization, stale content, and AI citation readiness. Spawns parallel subagents for comprehensive analysis. Produces per-post scores and … source

Source: jeremylongshore/claude-code-plugins-plus-skills

Skill Tier What it adds Upstream
abridge-reference-architecture core Implement Abridge reference architecture for clinical AI integration. Use when designing a new Abridge deployment, reviewing project structure, or planning multi-site health system rollouts with EHR integration. Trigger: "abridge … source
abridge-sdk-patterns core Apply production-ready patterns for Abridge clinical AI integration. Use when building reusable Abridge client wrappers, implementing HIPAA-compliant error handling, or establishing team coding standards for healthcare AI. Trigger: … source
attio-debug-bundle core Collect Attio integration diagnostic evidence -- API health, scopes, object schema, and rate limit status -- for debugging or support tickets. Trigger: "attio debug", "attio support bundle", "attio diagnostic", "collect attio logs", "attio … source
flyio-debug-bundle core Collect Fly.io debug evidence for support tickets including machine status, logs, health checks, volume state, and networking diagnostics. Trigger: "fly.io debug", "fly.io support", "fly.io diagnostic", "fly doctor". source
webflow-debug-bundle core Collect Webflow debug evidence for support tickets and troubleshooting. Gathers SDK version, token validation, rate limit status, site connectivity, CMS health, and error logs into a single diagnostic bundle. Trigger with phrases like … source
perplexity-observability core Set up monitoring for Perplexity Sonar API with latency, cost, citation quality, and error tracking. Use when implementing monitoring dashboards, setting up alerts, or tracking Perplexity API health in production. Trigger with phrases like … source
abridge-webhooks-events core Implement Abridge webhook handling for clinical documentation events. Use when receiving note completion notifications, encounter status changes, provider enrollment events, or quality alert callbacks from Abridge. Trigger: "abridge … source
adobe-advanced-troubleshooting core Apply advanced debugging techniques for Adobe API issues: IMS token introspection, Firefly job failure analysis, PDF Services error codes, and network-layer diagnostics for Adobe endpoints. Trigger with phrases like "adobe hard bug", … source
exa-advanced-troubleshooting core Apply advanced debugging techniques for hard-to-diagnose Exa issues. Use when standard troubleshooting fails, investigating latency spikes, or preparing evidence bundles for Exa support escalation. Trigger with phrases like "exa hard bug", … source
perplexity-advanced-troubleshooting core Apply advanced debugging techniques for hard-to-diagnose Perplexity Sonar API issues. Use when standard troubleshooting fails, investigating inconsistent citations, or preparing evidence for support escalation. Trigger with phrases like … source
abridge-security-basics core Apply HIPAA-compliant security practices for Abridge clinical AI integrations. Use when securing PHI in transit/at rest, configuring access controls, implementing audit logging, or preparing for HIPAA security audits. Trigger: "abridge … source
onenote-debug-bundle core Generate comprehensive diagnostic bundles for OneNote Graph API issues with request tracing and token analysis. Use when debugging OneNote API failures, filing Microsoft support tickets, or analyzing permission issues. Trigger with … source

Source: K-Dense-AI/claude-scientific-skills

Skill Tier What it adds Upstream
treatment-plans core Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, … source
clinical-reports core Write comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full … source
iso-13485-certification core Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO 13485 QMS documentation, including (1) conducting gap analysis of existing … source
exploratory-data-analysis core Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. … source
bgpt-paper-search core Search scientific papers and retrieve structured experimental data extracted from full-text studies via the BGPT MCP server. Returns 25+ fields per paper including methods, results, sample sizes, quality scores, and conclusions. Use for … source

Source: K-Dense-AI/scientific-agent-skills

Skill Tier What it adds Upstream
treatment-plans core Generate concise (3-4 page), focused medical treatment plans in LaTeX/PDF format for all clinical specialties. Supports general medical treatment, rehabilitation therapy, mental health care, chronic disease management, perioperative care, … source
clinical-reports core Write comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full … source
iso-13485-certification core Comprehensive toolkit for preparing ISO 13485 certification documentation for medical device Quality Management Systems. Use when users need help with ISO 13485 QMS documentation, including (1) conducting gap analysis of existing … source
exploratory-data-analysis core Perform comprehensive exploratory data analysis on scientific data files across 200+ file formats. This skill should be used when analyzing any scientific data file to understand its structure, content, quality, and characteristics. … source
bgpt-paper-search core Search scientific papers and retrieve structured experimental data extracted from full-text studies via the BGPT MCP server. Returns 25+ fields per paper including methods, results, sample sizes, quality scores, and conclusions. Use for … source

Source: ljagiello/ctf-skills

Skill Tier What it adds Upstream
ctf-forensics core Provides digital forensics and signal analysis techniques for CTF challenges. Use when analyzing disk images, memory dumps, event logs, network captures, cryptocurrency transactions, steganography, PDF analysis, Windows registry, … source

Source: mohitagw15856/pm-claude-skills

Skill Tier What it adds Upstream
patient-communication core Write clear, plain-English patient communications for any healthcare context. Use when asked to write a patient letter, patient information leaflet, appointment letter, test-results letter, discharge summary for patients, or health … source

Source: mukul975/Anthropic-Cybersecurity-Skills

Skill Tier What it adds Upstream
analyzing-macro-malware-in-office-documents core Analyzes malicious VBA macros embedded in Microsoft Office documents (Word, Excel, PowerPoint) to identify download cradles, payload execution, persistence mechanisms, and anti-analysis techniques. Uses olevba, oledump, and VBA … source

Source: mvanhorn/last30days-skill

Skill Tier What it adds Upstream
last30days core Research what people actually say about any topic in the last 30 days. Pulls posts and engagement from Reddit, X, YouTube, TikTok, Hacker News, Polymarket, GitHub, and the web. Includes a doctor health check to diagnose broken or missing … source

Source: nexu-io/open-design

Skill Tier What it adds Upstream
html-ppt-testing-safety-alert core A hospital data-governance briefing: patient-data risk, the control framework, accountability, and the approval the board must give. Built as a decision-grade policy briefing deck for health-system board, regulators. source

Source: nWave-ai/nWave

Skill Tier What it adds Upstream
nw-interviewing-techniques core Mom Test questioning toolkit, JTBD analysis, interview conduct, assumption testing framework, and hypothesis design source

Source: parcadei/Continuous-Claude-v3

Skill Tier What it adds Upstream
mot core System health check (MOT) for skills, agents, hooks, and memory source

Source: vibeeval/vibecosystem

Skill Tier What it adds Upstream
mot core System health check (MOT) for skills, agents, hooks, and memory source

Source: zebbern/claude-code-guide

Skill Tier What it adds Upstream
vc-industry-research core Generate professional primary market / venture capital industry research reports, including sector deep-dives, investment memos, and market analysis. Produces detailed PDF reports covering TMT, consumer, healthcare, and industrials. … source