feat: epidemiologist skill package v0.1.0

2026-08-14 16:46:39 +02:00
commit dfc86a855c
9 changed files with 980 additions and 0 deletions
--- a/PROVENANCE.md
+++ b/PROVENANCE.md
@@ -0,0 +1,31 @@
+# Data provenance — epidemiologist
+
+Where the content of this skill package comes from, counted by
+content items (tasks, competences, tools, evidence entries, curated
+knowledge). Rendered live by Gitea:
+
+```mermaid
+%%{init: {'theme':'base','themeVariables':{'pie1':'#f9a825','pie2':'#1e88e5','pie3':'#ff355e','pie4':'#d97757','pie5':'#8e24aa','pieOuterStrokeWidth':'0px','pieSectionTextColor':'#fff'}}}%%
+pie showData
+    title Content sources — epidemiologist
+    "ESCO (occupation & competences)" : 77
+    "O*NET (tasks & tools)" : 77
+    "Job boards (market evidence)" : 122
+    "Anthropic official Claude skills" : 5
+    "External AI skill packs (mapped)" : 138
+```
+
+| Source | Items | Share | Files |
+|---|---|---|---|
+| ESCO (occupation & competences) | 77 | 18.4 % | references/profile.md, references/skills.md |
+| O*NET (tasks & tools) | 77 | 18.4 % | references/tasks.md, references/tools.md |
+| Job boards (market evidence) | 122 | 29.1 % | references/market.md (full report) + "Market evidence" headline sections |
+| Wikipedia & AI expert curation | 0 | 0.0 % | glossary, literature, usecases, intake, quality, evals/ |
+| Anthropic official Claude skills | 5 | 1.2 % | references/ai-skills.md, section "anthropics/skills" (official Claude Code skills) |
+| External AI skill packs (mapped) | 138 | 32.9 % | references/ai-skills.md (per-source attribution inside) |
+| Stack Exchange practitioner Q&A (CC-BY-SA) | 0 | 0.0 % | references/practitioner-qa.md (per-entry attribution inside) |
+
+Licensing: O*NET (USDOL/ETA, CC BY 4.0) · ESCO (© European Union) ·
+job-ad evidence via official APIs (JSearch/Adzuna) · Wikipedia content
+paraphrased with source URLs — never copied · external AI skills are
+linked, not copied (Apache-2.0/MIT/source-available, see ai-skills.md).
--- a/SKILL.md
+++ b/SKILL.md
@@ -0,0 +1,80 @@
+---
+name: epidemiologist
+description: "Occupational skill for the role 'epidemiologist' (also: epidemiology science researcher, epidemiology researcher, epidemiology research analyst, epidemiology analyst, epidemiology research scientist, epidaemiologist). Use when the user asks for typical epidemiologist work such as: Monitor and report incidents of infectious diseases to local and state health agencies.; Communicate research findings on various types of diseases to health practitioners, policy makers, and the public.; Educate healthcare workers, patients, and the public about infectious and communicable diseases, including disease transmission and prevention."
+---
+
+# Epidemiologist
+
+Epidemiologists centre their research on origin and causes for illness eruption in humans. They determine the way in which diseases are spread out and propose risk preventive measures to health policy organisms.
+
+## Core workflow
+
+1. Monitor and report incidents of infectious diseases to local and state health agencies.
+2. Communicate research findings on various types of diseases to health practitioners, policy makers, and the public.
+3. Educate healthcare workers, patients, and the public about infectious and communicable diseases, including disease transmission and prevention.
+4. Write articles for publication in professional journals.
+5. Write grant applications to fund epidemiologic research.
+6. Oversee public health programs, including statistical analysis, health care planning, surveillance systems, and public health improvement.
+7. Investigate diseases or parasites to determine cause and risk factors, progress, life cycle, or mode of transmission.
+8. Plan and direct studies to investigate human or animal disease, preventive methods, and treatments for disease.
+
+## How to use this skill
+
+- Read [references/profile.md](references/profile.md) for the occupation profile and scope.
+- Consult [references/tasks.md](references/tasks.md) for the full task and activity inventory.
+- Check [references/skills.md](references/skills.md) for essential vs. optional competences.
+- Check [references/tools.md](references/tools.md) for the software commonly used in this role.
+- See [references/ai-skills.md](references/ai-skills.md) — matched external AI agent skills (per-source attribution).
+
+## Key competences (essential)
+
+- apply for research funding
+- apply research ethics and scientific integrity principles in research activities
+- apply scientific methods
+- apply statistical analysis techniques
+- biometrics
+- communicable diseases
+- communicate with a non-scientific audience
+- conduct research across disciplines
+- demonstrate disciplinary expertise
+- develop professional network with researchers and scientists
+- disseminate results to the scientific community
+- draft scientific or academic papers and technical documentation
+- epidemiology
+- evaluate research activities
+- gather experimental data
+
+## Hot technologies
+
+- IBM SPSS Statistics
+- SAS
+- Tableau
+- Microsoft Access
+- Structured query language SQL
+- Microsoft Outlook
+- ESRI ArcGIS software
+- Python
+- R
+- Microsoft Office software
+
+
+<!-- hot-tech -->
+
+## Hot technologies
+
+Top tools from 62 gated job ads (see references/market.md, as of 2026-07-11):
+
+- SAS — 24 %
+- Microsoft Excel — 10 %
+- Stata — 10 %
+- Microsoft Office — 8 %
+- Microsoft Word — 8 %
+- Microsoft Outlook — 6 %
+- Adobe Acrobat — 5 %
+- SharePoint — 5 %
+- Teams — 5 %
+
+<!-- hot-tech -->
+
+---
+*Sources: ESCO v1.2.1 (http://data.europa.eu/esco/occupation/b73c752b-9858-4f53-82de-f3a340cbcae9), O*NET 30.3 (19-1041.00). See manifest.json for licensing/attribution.*
--- a/manifest.json
+++ b/manifest.json
@@ -0,0 +1,196 @@
+{
+  "name": "epidemiologist",
+  "title": "epidemiologist",
+  "version": "0.1.0",
+  "layer": "core",
+  "language": "en",
+  "generated": "2026-07-07",
+  "ids": {
+    "esco_uri": "http://data.europa.eu/esco/occupation/b73c752b-9858-4f53-82de-f3a340cbcae9",
+    "esco_code": "2131.4.7",
+    "isco_group": "2131",
+    "onet_soc": "19-1041.00",
+    "crosswalk_match": "exactMatch"
+  },
+  "sources": [
+    {
+      "name": "ESCO",
+      "version": "1.2.1",
+      "url": "https://esco.ec.europa.eu/"
+    },
+    {
+      "name": "O*NET",
+      "version": "30.3",
+      "url": "https://www.onetcenter.org/",
+      "license": "CC BY 4.0"
+    }
+  ],
+  "attribution": "This package includes information from the O*NET Database (v30.3) by the U.S. Department of Labor, Employment and Training Administration (USDOL/ETA), CC BY 4.0. skillfactor is not endorsed by USDOL/ETA. ESCO data (v1.2.1) (c) European Union, used per the ESCO download conditions: https://esco.ec.europa.eu/en/use-esco/download",
+  "counts": {
+    "tasks": 16,
+    "dwas": 18,
+    "skills_essential": 45,
+    "skills_optional": 31,
+    "software": 42
+  },
+  "enrichment_ai_skills": {
+    "generated": "2026-07-14",
+    "method": "deterministic mapping (ISCO prefix + title/competence keywords)",
+    "sources": {
+      "anthropics/skills": {
+        "repo": "https://github.com/anthropics/skills",
+        "commit": "f6656c1",
+        "license": "Apache-2.0; the document skills (docx/pdf/pptx/xlsx) are source-available \u2014 see the LICENSE.txt in the upstream skill folder",
+        "skills": 2
+      },
+      "davila7/claude-code-templates": {
+        "repo": "https://github.com/davila7/claude-code-templates",
+        "commit": "fa79251",
+        "license": "MIT",
+        "skills": 12
+      },
+      "K-Dense-AI/claude-scientific-skills": {
+        "repo": "https://github.com/K-Dense-AI/claude-scientific-skills",
+        "commit": "4d97e29",
+        "license": "MIT",
+        "skills": 12
+      },
+      "K-Dense-AI/scientific-agent-skills": {
+        "repo": "https://github.com/K-Dense-AI/scientific-agent-skills",
+        "commit": "4d97e29",
+        "license": "MIT",
+        "skills": 12
+      },
+      "brycewang-stanford/Auto-Empirical-Research-Skills": {
+        "repo": "https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills",
+        "commit": "85bf545",
+        "license": "CC-BY-4.0",
+        "skills": 12
+      },
+      "fcakyon/claude-codex-settings": {
+        "repo": "https://github.com/fcakyon/claude-codex-settings",
+        "commit": "44b7c00",
+        "license": "Apache-2.0",
+        "skills": 1
+      },
+      "foryourhealth111-pixel/Vibe-Skills": {
+        "repo": "https://github.com/foryourhealth111-pixel/Vibe-Skills",
+        "commit": "34429a8",
+        "license": "Apache-2.0",
+        "skills": 11
+      },
+      "sanjay3290/ai-skills": {
+        "repo": "https://github.com/sanjay3290/ai-skills",
+        "commit": "3619692",
+        "license": "Apache-2.0",
+        "skills": 1
+      },
+      "mohitagw15856/pm-claude-skills": {
+        "repo": "https://github.com/mohitagw15856/pm-claude-skills",
+        "commit": "876fa30",
+        "license": "MIT",
+        "skills": 2
+      },
+      "ferdinandobons/startup-skill": {
+        "repo": "https://github.com/ferdinandobons/startup-skill",
+        "commit": "a5f97c3",
+        "license": "MIT",
+        "skills": 1
+      },
+      "zebbern/claude-code-guide": {
+        "repo": "https://github.com/zebbern/claude-code-guide",
+        "commit": "d2c5280",
+        "license": "MIT",
+        "skills": 1
+      },
+      "claude-world/director-mode-lite": {
+        "repo": "https://github.com/claude-world/director-mode-lite",
+        "commit": "9d0c333",
+        "license": "MIT",
+        "skills": 1
+      },
+      "nexu-io/open-design": {
+        "repo": "https://github.com/nexu-io/open-design",
+        "commit": "4b66023",
+        "license": "Apache-2.0",
+        "skills": 2
+      },
+      "staruhub/ClaudeSkills": {
+        "repo": "https://github.com/staruhub/ClaudeSkills",
+        "commit": "3d4045d",
+        "license": "MIT",
+        "skills": 1
+      },
+      "wanshuiyin/Auto-claude-code-research-in-sleep": {
+        "repo": "https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep",
+        "commit": "eb5c9d7",
+        "license": "MIT",
+        "skills": 1
+      },
+      "OpenRaiser/NanoResearch": {
+        "repo": "https://github.com/OpenRaiser/NanoResearch",
+        "commit": "7144364",
+        "license": "MIT",
+        "skills": 1
+      },
+      "Orchestra-Research/AI-research-SKILLs": {
+        "repo": "https://github.com/Orchestra-Research/AI-research-SKILLs",
+        "commit": "773a529",
+        "license": "MIT",
+        "skills": 1
+      },
+      "zechenzhangAGI/AI-research-SKILLs": {
+        "repo": "https://github.com/zechenzhangAGI/AI-research-SKILLs",
+        "commit": "773a529",
+        "license": "MIT",
+        "skills": 1
+      },
+      "a5c-ai/babysitter": {
+        "repo": "https://github.com/a5c-ai/babysitter",
+        "commit": "44a5d58b",
+        "license": "MIT",
+        "skills": 3
+      },
+      "open-gitagent/opengap": {
+        "repo": "https://github.com/open-gitagent/opengap",
+        "commit": "d7a8e2e",
+        "license": "MIT",
+        "skills": 1
+      },
+      "rohitg00/skillkit": {
+        "repo": "https://github.com/rohitg00/skillkit",
+        "commit": "d2e5c34",
+        "license": "Apache-2.0",
+        "skills": 1
+      }
+    },
+    "total_skills": 80,
+    "tiers": {
+      "core": 79,
+      "adjacent": 1
+    }
+  },
+  "provenance": {
+    "items": {
+      "esco": 77,
+      "onet": 77,
+      "jobads": 122,
+      "wiki_ai": 0,
+      "anthropic": 5,
+      "ai_skills": 138,
+      "stackx": 0
+    },
+    "share_percent": {
+      "esco": 18.4,
+      "onet": 18.4,
+      "jobads": 29.1,
+      "wiki_ai": 0.0,
+      "anthropic": 1.2,
+      "ai_skills": 32.9,
+      "stackx": 0.0
+    },
+    "method": "content items per source category"
+  },
+  "collar": "white",
+  "computer_work": true
+}
--- a/references/ai-skills.md
+++ b/references/ai-skills.md
@@ -0,0 +1,266 @@
+# External AI agent skills — epidemiologist
+
+Proven, publicly available AI agent skills mapped to this occupation.
+Nothing is copied from the sources: every entry is a name, a one-line
+summary and a link to the upstream skill package. Each section names
+its source repository, commit, license and retrieval date.
+
+**Tiers:** `core` = the skill directly exercises a top market hard
+skill, tool or method (from gated job-ad evidence) or an essential
+ESCO competence of this occupation; `adjacent` =
+plausibly useful, secondary. Entries are capped at 12 per source
+and 80 in total per occupation (core first,
+strongest matches survive); everything beyond the caps is excluded
+and logged in the pipeline audit trail, not in this package.
+
+_Matched deterministically (ISCO group + title/competence keywords,
+tiered against market evidence + ESCO essentials) by
+`pipeline/p5_enrich_ai_skills.py` on 2026-07-14._
+
+## Source: anthropics/skills
+
+- Repository: [https://github.com/anthropics/skills](https://github.com/anthropics/skills) (commit `f6656c1`, retrieved 2026-07-14)
+- License: Apache-2.0; the document skills (docx/pdf/pptx/xlsx) are source-available — see the LICENSE.txt in the upstream skill folder
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `docx` | core | Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files) or Word templates (.dotx files). Triggers include: any mention of 'Word doc', 'word document', '.docx', '.dotx', or requests to … | [source](https://github.com/anthropics/skills/tree/main/skills/docx) |
+| `pdf` | adjacent | Use this skill whenever the user wants to do anything with PDF files. This includes reading or extracting text/tables from PDFs, combining or merging multiple PDFs into one, splitting PDFs apart, rotating pages, adding watermarks, creating … | [source](https://github.com/anthropics/skills/tree/main/skills/pdf) |
+
+## Source: a5c-ai/babysitter
+
+- Repository: [https://github.com/a5c-ai/babysitter](https://github.com/a5c-ai/babysitter) (commit `44a5d58b`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `meta-analysis-engine` | core | Skill for conducting meta-analyses of research findings | [source](https://github.com/a5c-ai/babysitter/tree/44a5d58b/library/specializations/domains/science/scientific-discovery/skills/meta-analysis-engine) |
+| `planning-patterns` | core | Structured planning methodology with research, brainstorming, phased plan creation, risk assessment, and plan-to-build continuity. | [source](https://github.com/a5c-ai/babysitter/tree/44a5d58b/library/methodologies/cc10x/skills/planning-patterns) |
+| `elicit-research-assistant` | core | AI-assisted literature review for question-answering over papers and evidence synthesis | [source](https://github.com/a5c-ai/babysitter/tree/44a5d58b/library/specializations/domains/science/scientific-discovery/skills/elicit-research-assistant) |
+
+## Source: brycewang-stanford/Auto-Empirical-Research-Skills
+
+- Repository: [https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills) (commit `85bf545`, retrieved 2026-07-14)
+- License: CC-BY-4.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `methodology-skills` | core | 13 research methodology skills. Trigger: study design, methodology selection, scientific reasoning, mentoring. Design: rigorous methods frameworks covering qualitative, quantitative, and mixed approaches. | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/research/methodology) |
+| `academic-baseline` | core | Use when working on any empirical academic research context — paper writing, data analysis, literature review, or any task involving citations, results, or publication artifacts. Establishes non-negotiable principles that govern all other … | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/60-regisely-superpapers/skills/academic-baseline) |
+| `econ-audit` | core | Audit economic analysis outputs (fiscal briefings, macro briefings, market research, longlists, and other quantitative economic documents) against methodology standards, academic literature, and common errors. Runs structured checks across … | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/58-charlescoverdale-econstack/econ-audit) |
+| `hud` | core | Diverga HUD (Heads-Up Display) management skill. Configure and manage the research project statusline display. Supports multiple presets: research, checkpoint, memory, minimal. Triggers: "hud", "statusline", "display settings | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/25-HosungYou-Diverga/skills/hud) |
+| `psychology-research-guide` | core | Psychological research methods, experimental design, and analysis | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/domains/social-science/psychology-research-guide) |
+| `research-ideation` | core | This skill should be used when the user asks to "brainstorm research ideas", "use 5W1H framework", "identify research gaps", "conduct gap analysis", "start research project", "conduct literature review", "define research question", "select … | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/33-Galaxy-Dawn-claude-scholar/skills/research-ideation) |
+| `claude-scientific-guide` | core | Ready-to-use agent skills for scientific research and engineering | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/research/methodology/claude-scientific-guide) |
+| `automation-skills` | core | 10 research automation skills. Trigger: automating experiments, tracking results, reproducible pipelines. Design: ML experiment management, workflow orchestration, and lab automation tools. | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/research/automation) |
+| `law-skills` | core | 9 legal research skills. Trigger: legal research, case law analysis, regulatory compliance. Design: legal databases, citation networks, and judicial analytics tools. | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/domains/law) |
+| `new-project` | core | Full research pipeline from idea to paper. Orchestrates all phases — discovery, strategy, analysis, writing, peer review, and submission. Use when starting a new research project from scratch. | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/16-hsantanna88-clo-author/dot-claude/skills/new-project) |
+| `dowhy` | core | Causal inference framework for answering "does X cause Y?" beyond correlation. DoWhy (Microsoft Research) provides the identify-estimate-refute loop: define a causal graph (DAG), identify the causal effect using … | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/63-tondevrel-scientific-agent-skills/dowhy) |
+| `deep-research-skills` | core | 13 deep research & systematic reviews skills. Trigger: systematic reviews, multi-source synthesis, comprehensive literature surveys. Design: multi-step research protocols with quality assessment and evidence grading. | [source](https://github.com/brycewang-stanford/Auto-Empirical-Research-Skills/tree/85bf545/skills/43-wentorai-research-plugins/skills/research/deep-research) |
+
+## Source: claude-world/director-mode-lite
+
+- Repository: [https://github.com/claude-world/director-mode-lite](https://github.com/claude-world/director-mode-lite) (commit `9d0c333`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `handoff-gemini` | core | Delegate long-context analysis, research, and large-document summarization to Google Gemini CLI (1M-token context) via non-interactive `gemini -p`, preserving Claude context. Use when the user says 'use gemini'/'hand off to gemini' or a … | [source](https://github.com/claude-world/director-mode-lite/tree/9d0c333/skills/handoff-gemini) |
+
+## Source: davila7/claude-code-templates
+
+- Repository: [https://github.com/davila7/claude-code-templates](https://github.com/davila7/claude-code-templates) (commit `fa79251`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `scientific-critical-thinking` | core | Evaluate research rigor. Assess methodology, experimental design, statistical validity, biases, confounding, evidence quality (GRADE, Cochrane ROB), for critical analysis of scientific claims. | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/scientific-critical-thinking) |
+| `latex-posters` | core | Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/latex-posters) |
+| `denario` | core | Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/denario) |
+| `scientific-slides` | core | Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/scientific-slides) |
+| `market-research-reports` | core | Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/market-research-reports) |
+| `research-engineer` | core | An uncompromising Academic Research Engineer. Operates with absolute scientific rigor, objective criticism, and zero flair. Focuses on theoretical correctness, formal verification, and optimal implementation across any required technology. | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/ai-research/research-engineer) |
+| `scientific-writing` | core | Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process: (1) create section outlines with key points using research-lookup, (2) convert to flowing … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/scientific-writing) |
+| `venue-templates` | core | Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/venue-templates) |
+| `scientific-brainstorming` | core | Research ideation partner. Generate hypotheses, explore interdisciplinary connections, challenge assumptions, develop methodologies, identify research gaps, for creative scientific problem-solving. | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/scientific-brainstorming) |
+| `statistical-analysis` | core | Statistical analysis toolkit. Hypothesis tests (t-test, ANOVA, chi-square), regression, correlation, Bayesian stats, power analysis, assumption checks, APA reporting, for academic research. | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/statistical-analysis) |
+| `citation-management` | core | Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/citation-management) |
+| `openalex-database` | core | Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open … | [source](https://github.com/davila7/claude-code-templates/tree/fa79251/cli-tool/components/skills/scientific/openalex-database) |
+
+## Source: fcakyon/claude-codex-settings
+
+- Repository: [https://github.com/fcakyon/claude-codex-settings](https://github.com/fcakyon/claude-codex-settings) (commit `44b7c00`, retrieved 2026-07-14)
+- License: Apache-2.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `paper-search-usage` | core | This skill should be used when user asks to "search for papers", "find research papers", "search arXiv", "search PubMed", "find academic papers", "search IEEE", "search Scopus", or "look up scientific literature". | [source](https://github.com/fcakyon/claude-codex-settings/tree/44b7c00/plugins/paper-search-tools/skills/paper-search-usage) |
+
+## Source: ferdinandobons/startup-skill
+
+- Repository: [https://github.com/ferdinandobons/startup-skill](https://github.com/ferdinandobons/startup-skill) (commit `a5f97c3`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `startup-design` | core | Design, validate, and plan a startup from scratch. Covers market research, competitive analysis, business model, brand identity, product definition, financial projections, and validation experiments. Trigger when the user has a startup … | [source](https://github.com/ferdinandobons/startup-skill/tree/a5f97c3/startup-design) |
+
+## Source: foryourhealth111-pixel/Vibe-Skills
+
+- Repository: [https://github.com/foryourhealth111-pixel/Vibe-Skills](https://github.com/foryourhealth111-pixel/Vibe-Skills) (commit `34429a8`, retrieved 2026-07-14)
+- License: Apache-2.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `scientific-reporting` | core | Write research/technical reports with strong structure + figure standards. Supports Markdown/HTML/PDF outputs (Quarto optional), executive summary, methods, results, discussion, and reproducibility appendix. | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/scientific-reporting) |
+| `denario` | core | Multiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/denario) |
+| `scientific-brainstorming` | core | Open-ended scientific ideation partner. Use for research gaps, mechanism exploration, interdisciplinary connections, assumptions, possible research directions, and lightweight literature matrix or A+B paper-combination idea mapping. For … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/scientific-brainstorming) |
+| `scientific-slides` | core | Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/scientific-slides) |
+| `scholar-evaluation` | core | Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/scholar-evaluation) |
+| `slides-as-code` | core | Build research slides with text-first source (Slidev/Marp/Reveal/Quarto) and reproducible export (PDF). Includes structure, figure reuse rules, and quality checklist for top-tier scientific presentations. | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/slides-as-code) |
+| `statistical-analysis` | core | Statistical analysis toolkit. Hypothesis tests (t-test, ANOVA, chi-square), regression, correlation, Bayesian stats, power analysis, assumption checks, APA reporting, for academic research. | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/statistical-analysis) |
+| `openalex-database` | core | Query and analyze scholarly literature using the OpenAlex database. This skill should be used when searching for academic papers, analyzing research trends, finding works by authors or institutions, tracking citations, discovering open … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/openalex-database) |
+| `literature-review` | core | Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/literature-review) |
+| `citation-management` | core | Comprehensive citation management for academic research. Resolve bibliographic identifiers, extract accurate metadata, validate citations, deduplicate references, and generate properly formatted BibTeX entries. This skill should be used … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/citation-management) |
+| `scientific-critical-thinking` | core | Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases and confounders, applying evidence grading frameworks (GRADE, Cochrane Risk of Bias), or teaching critical analysis. Best … | [source](https://github.com/foryourhealth111-pixel/Vibe-Skills/tree/34429a8/bundled/skills/scientific-critical-thinking) |
+
+## Source: K-Dense-AI/claude-scientific-skills
+
+- Repository: [https://github.com/K-Dense-AI/claude-scientific-skills](https://github.com/K-Dense-AI/claude-scientific-skills) (commit `4d97e29`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `latex-posters` | core | Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/latex-posters) |
+| `scientific-slides` | core | Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/scientific-slides) |
+| `market-research-reports` | core | Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/market-research-reports) |
+| `research-lookup` | core | Look up current research and scientific information across three backends: fast web search via parallel-cli (default), the Parallel Chat API for deep multi-source synthesis, and Perplexity sonar-pro-search for scholarly paper searches. … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/research-lookup) |
+| `scientific-brainstorming` | core | Creative research ideation and exploration. Use for open-ended brainstorming sessions, exploring interdisciplinary connections, challenging assumptions, or identifying research gaps. Best for early-stage research planning when you do not … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/scientific-brainstorming) |
+| `scientific-writing` | core | Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/scientific-writing) |
+| `venue-templates` | core | Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/venue-templates) |
+| `autoskill` | core | Observe the user's screen via screenpipe, detect repeated research workflows, match them against existing scientific-agent-skills, and draft new skills (or composition recipes that chain existing ones) for the patterns not yet covered. Use … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/autoskill) |
+| `exa-search` | core | Web toolkit powered by Exa, tuned for scientific and technical content. Use this skill when the user needs to search the web or fetch/extract URL content. Covers: web search (semantic lookups, research, current info — with optional … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/exa-search) |
+| `scholar-evaluation` | core | Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/scholar-evaluation) |
+| `citation-management` | core | Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/citation-management) |
+| `literature-review` | core | Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research … | [source](https://github.com/K-Dense-AI/claude-scientific-skills/tree/4d97e29/skills/literature-review) |
+
+## Source: K-Dense-AI/scientific-agent-skills
+
+- Repository: [https://github.com/K-Dense-AI/scientific-agent-skills](https://github.com/K-Dense-AI/scientific-agent-skills) (commit `4d97e29`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `latex-posters` | core | Create professional research posters in LaTeX using beamerposter, tikzposter, or baposter. Support for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/latex-posters) |
+| `scientific-slides` | core | Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference presentations, seminar talks, research presentations, thesis defense slides, or any scientific talk. Provides slide structure, design … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/scientific-slides) |
+| `market-research-reports` | core | Generate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/market-research-reports) |
+| `research-lookup` | core | Look up current research and scientific information across three backends: fast web search via parallel-cli (default), the Parallel Chat API for deep multi-source synthesis, and Perplexity sonar-pro-search for scholarly paper searches. … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/research-lookup) |
+| `scientific-brainstorming` | core | Creative research ideation and exploration. Use for open-ended brainstorming sessions, exploring interdisciplinary connections, challenging assumptions, or identifying research gaps. Best for early-stage research planning when you do not … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/scientific-brainstorming) |
+| `scientific-writing` | core | Core skill for the deep research and writing tool. Write scientific manuscripts in full paragraphs (never bullet points). Use two-stage process with (1) section outlines with key points using research-lookup then (2) convert to flowing … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/scientific-writing) |
+| `venue-templates` | core | Access comprehensive LaTeX templates, formatting requirements, and submission guidelines for major scientific publication venues (Nature, Science, PLOS, IEEE, ACM), academic conferences (NeurIPS, ICML, CVPR, CHI), research posters, and … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/venue-templates) |
+| `autoskill` | core | Observe the user's screen via screenpipe, detect repeated research workflows, match them against existing scientific-agent-skills, and draft new skills (or composition recipes that chain existing ones) for the patterns not yet covered. Use … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/autoskill) |
+| `exa-search` | core | Web toolkit powered by Exa, tuned for scientific and technical content. Use this skill when the user needs to search the web or fetch/extract URL content. Covers: web search (semantic lookups, research, current info — with optional … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/exa-search) |
+| `scholar-evaluation` | core | Systematically evaluate scholarly work using the ScholarEval framework, providing structured assessment across research quality dimensions including problem formulation, methodology, analysis, and writing with quantitative scoring and … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/scholar-evaluation) |
+| `citation-management` | core | Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/citation-management) |
+| `literature-review` | core | Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research … | [source](https://github.com/K-Dense-AI/scientific-agent-skills/tree/4d97e29/skills/literature-review) |
+
+## Source: mohitagw15856/pm-claude-skills
+
+- Repository: [https://github.com/mohitagw15856/pm-claude-skills](https://github.com/mohitagw15856/pm-claude-skills) (commit `876fa30`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `research-protocol` | core | Write a structured research protocol or study design document. Use when asked to write a research protocol, study protocol, research plan, methodology section, or research proposal. Produces a complete protocol with objectives, … | [source](https://github.com/mohitagw15856/pm-claude-skills/tree/876fa30/plugins/pm-research/skills/research-protocol) |
+| `literature-review` | core | Structure and write a literature review for any research topic. Use when asked to write a literature review, systematic review summary, narrative review, or research background section. Produces a structured review with thematic … | [source](https://github.com/mohitagw15856/pm-claude-skills/tree/876fa30/plugins/pm-research/skills/literature-review) |
+
+## Source: nexu-io/open-design
+
+- Repository: [https://github.com/nexu-io/open-design](https://github.com/nexu-io/open-design) (commit `4b66023`, retrieved 2026-07-14)
+- License: Apache-2.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `html-ppt-zhangzara-monochrome` | core | A grant proposal on CRISPR base-editing for sickle-cell disease — the hypothesis, the approach, the milestones, and the risk. Built as a decision-grade academic research deck for grant review committee. | [source](https://github.com/nexu-io/open-design/tree/4b66023/design-templates/html-ppt-zhangzara-monochrome) |
+| `kami-deck` | core | A lab-meeting deck on gut-microbiome links to sleep quality — the design, the results, the caveats, and the next experiment. Built as a decision-grade academic research deck for lab group, PI. | [source](https://github.com/nexu-io/open-design/tree/4b66023/design-templates/kami-deck) |
+
+## Source: open-gitagent/opengap
+
+- Repository: [https://github.com/open-gitagent/opengap](https://github.com/open-gitagent/opengap) (commit `d7a8e2e`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `research` | core | Researches a topic by breaking it into subtopics, gathering factual information with reasoning, and producing a structured summary with key findings and open questions. Use when the user asks to research, investigate, look up, summarize a … | [source](https://github.com/open-gitagent/opengap/tree/d7a8e2e/examples/lyzr-agent/skills/research) |
+
+## Source: OpenRaiser/NanoResearch
+
+- Repository: [https://github.com/OpenRaiser/NanoResearch](https://github.com/OpenRaiser/NanoResearch) (commit `7144364`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `academic-plotting` | core | Generates publication-quality figures for ML papers from research context. Given a paper section or description, extracts system components and relationships to generate architecture diagrams via Gemini. Given experiment results or data, … | [source](https://github.com/OpenRaiser/NanoResearch/tree/7144364/skills/vendor-ai-research/academic-plotting) |
+
+## Source: Orchestra-Research/AI-research-SKILLs
+
+- Repository: [https://github.com/Orchestra-Research/AI-research-SKILLs](https://github.com/Orchestra-Research/AI-research-SKILLs) (commit `773a529`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `academic-plotting` | core | Generates publication-quality figures for ML papers from research context. Given a paper section or description, extracts system components and relationships to generate architecture diagrams via Gemini. Given experiment results or data, … | [source](https://github.com/Orchestra-Research/AI-research-SKILLs/tree/773a529/20-ml-paper-writing/academic-plotting) |
+
+## Source: rohitg00/skillkit
+
+- Repository: [https://github.com/rohitg00/skillkit](https://github.com/rohitg00/skillkit) (commit `d2e5c34`, retrieved 2026-07-14)
+- License: Apache-2.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `task-decomposition` | core | Breaks down complex software, writing, or research tasks into small, atomic, independently completable units with dependency graphs and milestone breakdowns. Use when the user asks to plan a project, decompose a feature, create subtasks, … | [source](https://github.com/rohitg00/skillkit/tree/d2e5c34/packages/core/src/methodology/packs/planning/task-decomposition) |
+
+## Source: sanjay3290/ai-skills
+
+- Repository: [https://github.com/sanjay3290/ai-skills](https://github.com/sanjay3290/ai-skills) (commit `3619692`, retrieved 2026-07-14)
+- License: Apache-2.0
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `deep-research` | core | Execute autonomous multi-step research using Google Gemini Deep Research Agent. Use for: market analysis, competitive landscaping, literature reviews, technical research, due diligence. Takes 2-10 minutes but produces detailed, cited … | [source](https://github.com/sanjay3290/ai-skills/tree/3619692/skills/deep-research) |
+
+## Source: staruhub/ClaudeSkills
+
+- Repository: [https://github.com/staruhub/ClaudeSkills](https://github.com/staruhub/ClaudeSkills) (commit `3d4045d`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `deep-research` | core | Use this skill when the user wants an evidence-based research memo, literature review, market/policy/technical landscape, or a multi-source decision brief with citations, trade-offs, and a clear conclusion. Best for tasks that need … | [source](https://github.com/staruhub/ClaudeSkills/tree/3d4045d/skills/Geek-skills-deep-research) |
+
+## Source: wanshuiyin/Auto-claude-code-research-in-sleep
+
+- Repository: [https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep](https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep) (commit `eb5c9d7`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `research-lit` | core | Search and analyze research papers, find related work, summarize key ideas. Use when user says "find papers", "related work", "literature review", "what does this paper say", or needs to understand academic papers. | [source](https://github.com/wanshuiyin/Auto-claude-code-research-in-sleep/tree/eb5c9d7/skills/research-lit) |
+
+## Source: zebbern/claude-code-guide
+
+- Repository: [https://github.com/zebbern/claude-code-guide](https://github.com/zebbern/claude-code-guide) (commit `d2c5280`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `vc-industry-research` | core | Generate professional primary market / venture capital industry research reports, including sector deep-dives, investment memos, and market analysis. Produces detailed PDF reports covering TMT, consumer, healthcare, and industrials. … | [source](https://github.com/zebbern/claude-code-guide/tree/d2c5280/skills/vc-industry-research) |
+
+## Source: zechenzhangAGI/AI-research-SKILLs
+
+- Repository: [https://github.com/zechenzhangAGI/AI-research-SKILLs](https://github.com/zechenzhangAGI/AI-research-SKILLs) (commit `773a529`, retrieved 2026-07-14)
+- License: MIT
+
+| Skill | Tier | What it adds | Upstream |
+|---|---|---|---|
+| `academic-plotting` | core | Generates publication-quality figures for ML papers from research context. Given a paper section or description, extracts system components and relationships to generate architecture diagrams via Gemini. Given experiment results or data, … | [source](https://github.com/zechenzhangAGI/AI-research-SKILLs/tree/773a529/20-ml-paper-writing/academic-plotting) |
--- a/references/market.md
+++ b/references/market.md
@@ -0,0 +1,159 @@
+# Market evidence report — epidemiologist
+
+Source: **62 real job ads** (JSearch API, countries: us 62), extracted into the MSSQL evidence store; as of 2026-07-11.
+This report contains extracted, aggregated facts only — no ad text is
+reproduced (copyright / platform terms).
+
+## Seniority distribution
+
+| Seniority | Ads | Share |
+|---|---|---|
+| lead | 31 | 50 % |
+| mid | 27 | 44 % |
+| senior | 4 | 6 % |
+
+## Tools — full market ranking
+
+| # | Item | Ads | Share |
+|---|---|---|---|
+| 1 | SAS | 15 | 24 % |
+| 2 | Microsoft Excel | 6 | 10 % |
+| 3 | Stata | 6 | 10 % |
+| 4 | Microsoft Office | 5 | 8 % |
+| 5 | Microsoft Word | 5 | 8 % |
+| 6 | Microsoft Outlook | 4 | 6 % |
+| 7 | Adobe Acrobat | 3 | 5 % |
+| 8 | SharePoint | 3 | 5 % |
+| 9 | Teams | 3 | 5 % |
+
+## Hard skills — full market ranking
+
+| # | Item | Ads | Share |
+|---|---|---|---|
+| 1 | data analysis | 45 | 73 % |
+| 2 | data management | 33 | 53 % |
+| 3 | protocol development | 31 | 50 % |
+| 4 | benefit-risk assessment | 30 | 48 % |
+| 5 | epidemiology research | 30 | 48 % |
+| 6 | regulatory submissions | 30 | 48 % |
+| 7 | vendor management | 30 | 48 % |
+| 8 | statistical analysis | 20 | 32 % |
+| 9 | study design | 9 | 15 % |
+| 10 | epidemiology | 7 | 11 % |
+| 11 | causal inference | 6 | 10 % |
+| 12 | epidemiological investigation | 5 | 8 % |
+| 13 | epidemiological research | 4 | 6 % |
+| 14 | clinical trial design | 3 | 5 % |
+| 15 | data visualization | 3 | 5 % |
+| 16 | data wrangling | 3 | 5 % |
+| 17 | grant writing | 3 | 5 % |
+| 18 | literature review | 3 | 5 % |
+| 19 | longitudinal data analysis | 3 | 5 % |
+| 20 | observational research | 3 | 5 % |
+| 21 | program evaluation | 3 | 5 % |
+| 22 | survival analysis | 3 | 5 % |
+
+## Methods — full market ranking
+
+| # | Item | Ads | Share |
+|---|---|---|---|
+| 1 | cross-functional team leadership | 30 | 48 % |
+| 2 | organizational process improvement | 30 | 48 % |
+| 3 | structured benefit-risk assessments | 30 | 48 % |
+
+## Responsibilities — full market ranking
+
+| # | Item | Ads | Share |
+|---|---|---|---|
+| 1 | best practice implementation | 30 | 48 % |
+| 2 | departmental growth facilitation | 30 | 48 % |
+| 3 | epidemiology study execution | 30 | 48 % |
+| 4 | regulatory document contribution | 30 | 48 % |
+| 5 | research strategy definition | 30 | 48 % |
+| 6 | rwe generation | 30 | 48 % |
+| 7 | data analysis | 13 | 21 % |
+| 8 | report preparation | 6 | 10 % |
+| 9 | data collection | 5 | 8 % |
+| 10 | manuscript preparation | 5 | 8 % |
+| 11 | research collaboration | 4 | 6 % |
+| 12 | staff supervision | 4 | 6 % |
+| 13 | data dissemination | 3 | 5 % |
+| 14 | data interpretation | 3 | 5 % |
+| 15 | study protocol development | 3 | 5 % |
+
+## Regional breakdown
+
+> **Corpus note:** 62 relevant ads in total — below the 100-ad target for a fully reliable ranking. Percentages above should be read as indicative.
+
+### US (us)
+
+62 ads.
+
+**Top hard skills:**
+
+- data analysis — 73 % (45 ads)
+- data management — 53 % (33 ads)
+- protocol development — 50 % (31 ads)
+- benefit-risk assessment — 48 % (30 ads)
+- epidemiology research — 48 % (30 ads)
+- regulatory submissions — 48 % (30 ads)
+- vendor management — 48 % (30 ads)
+- statistical analysis — 32 % (20 ads)
+- study design — 15 % (9 ads)
+- epidemiology — 11 % (7 ads)
+
+**Top tools:**
+
+- SAS — 24 % (15 ads)
+- Microsoft Excel — 10 % (6 ads)
+- Stata — 10 % (6 ads)
+- Microsoft Office — 8 % (5 ads)
+- Microsoft Word — 8 % (5 ads)
+- Microsoft Outlook — 6 % (4 ads)
+- Adobe Acrobat — 5 % (3 ads)
+- SharePoint — 5 % (3 ads)
+- Teams — 5 % (3 ads)
+- Microsoft PowerPoint — 3 % (2 ads)
+
+**Seniority:** lead 50 % · mid 44 % · senior 6 %
+
+### UK (gb)
+
+**Insufficient evidence** — 0 ads (minimum for a regional ranking: 30). No ranking is reported for this region.
+
+### EU/DACH (de, at, ch, nl)
+
+**Insufficient evidence** — 0 ads (minimum for a regional ranking: 30). No ranking is reported for this region.
+
+
+## Job title variants in the market
+
+| Title | Ads |
+|---|---|
+| Director, Epidemiology | 30 |
+| Epidemiologist | 3 |
+| Research Scientist for Disaster Epidemiology, World Trade Center Health Registry | 2 |
+| [Remote] Research Scientist - Epidemiology and Scientific Affairs | 1 |
+| Academic Faculty Open Rank - Cancer Epidemiology | 1 |
+| Biostatistician / Epidemiologist – Clinical Epidemiology Research Center (CERC) and Yale University | 1 |
+| Clinical Epidemiology Fellow | 1 |
+| Director of Science | 1 |
+| Director, Data Coordinating Center, Clinical Trial Epidemiologist | 1 |
+| Epidemiologist (RWE) | 1 |
+| EPIDEMIOLOGIST II | 1 |
+| Epidemiologist II - MED | 1 |
+| Epidemiologist Jobs | 1 |
+| Epidemiologist Mid-Level (Lead) | 1 |
+| Epidemiology Research Associate | 1 |
+| Infection Control Epidemiologist II | 1 |
+| Mid Level Statistician/Epidemiologist | 1 |
+| Mid Level Statistician/Epidemiologist Jobs | 1 |
+| Mid Level Statistician/Epidemiologist with Security Clearance | 1 |
+| Public Health Epidemiologist (Public Health Data Analyst) | 1 |
+| Research Associate  Epidemiology | 1 |
+| Research Associate – Epidemiology | 1 |
+| Research Epidemiologist | 1 |
+| Research Scientist - Epidemiology and Scientific Affairs | 1 |
+| Research Scientist 2 (Epidemiology) - 24737 | 1 |
+
+Methodology: entities extracted per ad ({hard_skills, tools, methods, responsibilities, seniority}), normalized, counted as DISTINCT ads per entity; report threshold ≥ 3 ads. Headline sections in skills.md/tools.md use the stricter ≥ 20 % threshold.
--- a/references/profile.md
+++ b/references/profile.md
@@ -0,0 +1,25 @@
+# Occupation profile — epidemiologist
+
+- **ESCO URI:** http://data.europa.eu/esco/occupation/b73c752b-9858-4f53-82de-f3a340cbcae9
+- **ESCO code:** 2131.4.7
+- **ISCO-08 group:** 2131 — Biologists, botanists, zoologists and related professionals
+- **O*NET-SOC:** 19-1041.00 — Epidemiologists (match: exactMatch)
+
+## Description (ESCO)
+
+Epidemiologists centre their research on origin and causes for illness eruption in humans. They determine the way in which diseases are spread out and propose risk preventive measures to health policy organisms.
+
+## Definition
+
+nan
+
+## Alternative labels
+
+- epidemiology science researcher
+- epidemiology researcher
+- epidemiology research analyst
+- epidemiology analyst
+- epidemiology research scientist
+- epidaemiologist
+- epidemiology scholar
+- epidemiology scientist
--- a/references/skills.md
+++ b/references/skills.md
@@ -0,0 +1,120 @@
+# Competences — epidemiologist
+
+Source: ESCO v1.2.1 occupation-skill relations (http://data.europa.eu/esco/occupation/b73c752b-9858-4f53-82de-f3a340cbcae9).
+
+## Essential
+
+- **apply for research funding** (skill/competence)
+- **apply research ethics and scientific integrity principles in research activities** (skill/competence)
+- **apply scientific methods** (skill/competence)
+- **apply statistical analysis techniques** (skill/competence)
+- **biometrics** (knowledge)
+- **communicable diseases** (knowledge)
+- **communicate with a non-scientific audience** (skill/competence)
+- **conduct research across disciplines** (skill/competence)
+- **demonstrate disciplinary expertise** (skill/competence)
+- **develop professional network with researchers and scientists** (skill/competence)
+- **disseminate results to the scientific community** (skill/competence)
+- **draft scientific or academic papers and technical documentation** (skill/competence)
+- **epidemiology** (knowledge)
+- **evaluate research activities** (skill/competence)
+- **gather experimental data** (skill/competence)
+- **increase the impact of science on policy and society** (skill/competence)
+- **integrate gender dimension in research** (skill/competence)
+- **interact professionally in research and professional environments** (skill/competence)
+- **manage findable accessible interoperable and reusable data** (skill/competence)
+- **manage intellectual property rights** (skill/competence)
+- **manage open publications** (skill/competence)
+- **manage personal professional development** (skill/competence)
+- **manage research data** (skill/competence)
+- **mentor individuals** (skill/competence)
+- **operate open source software** (skill/competence)
+- **perform project management** (skill/competence)
+- **perform scientific research** (skill/competence)
+- **prevent communicable diseases' outbreaks** (skill/competence)
+- **preventive medicine** (knowledge)
+- **project management** (knowledge)
+- **promote open innovation in research** (skill/competence)
+- **promote the participation of citizens in scientific and research activities** (skill/competence)
+- **promote the transfer of knowledge** (skill/competence)
+- **public health** (knowledge)
+- **publish academic research** (skill/competence)
+- **report analysis results** (skill/competence)
+- **research design** (knowledge)
+- **scientific literature** (knowledge)
+- **scientific research methodology** (knowledge)
+- **speak different languages** (skill/competence)
+- **statistics** (knowledge)
+- **synthesise information** (skill/competence)
+- **take disease prevention measures** (skill/competence)
+- **think abstractly** (skill/competence)
+- **write scientific publications** (skill/competence)
+
+## Optional
+
+- advise on legislative acts (skill/competence)
+- analyse blood samples (skill/competence)
+- apply blended learning (skill/competence)
+- archive scientific documentation (skill/competence)
+- assess environmental impact (skill/competence)
+- assist in clinical trials (skill/competence)
+- biological chemistry (knowledge)
+- biology (knowledge)
+- contribute to practice innovation in health care (skill/competence)
+- contribute to public health campaigns (skill/competence)
+- develop communicable disease control policies (skill/competence)
+- develop scientific research protocols (skill/competence)
+- develop scientific theories (skill/competence)
+- develop vaccines (skill/competence)
+- educate on the prevention of illness (skill/competence)
+- general medicine (knowledge)
+- genomics (knowledge)
+- immunology (knowledge)
+- inform policy makers on health-related challenges (skill/competence)
+- laboratory techniques (knowledge)
+- life sciences (knowledge)
+- manage clinical risk (skill/competence)
+- manufacture medicines (skill/competence)
+- microbiology-bacteriology (knowledge)
+- multidisciplinary research (knowledge)
+- perform laboratory tests (skill/competence)
+- professional documentation in health care (knowledge)
+- SAS language (knowledge)
+- statistical analysis system software (knowledge)
+- teach in academic or vocational contexts (skill/competence)
+- virology (knowledge)
+
+<!-- market-evidence -->
+
+## Market evidence (job-ad analysis, 62 ads, as of 2026-07-11)
+
+Share of analyzed job ads mentioning the item (threshold ≥ 20 %). Source: JSearch/Adzuna APIs.
+
+### Hard skills
+
+- data analysis — **73 %**
+- data management — **53 %**
+- protocol development — **50 %**
+- regulatory submissions — **48 %**
+- epidemiology research — **48 %**
+- benefit-risk assessment — **48 %**
+- vendor management — **48 %**
+- statistical analysis — **32 %**
+
+### Methods
+
+- structured benefit-risk assessments — **48 %**
+- cross-functional team leadership — **48 %**
+- organizational process improvement — **48 %**
+
+### Responsibilities
+
+- regulatory document contribution — **48 %**
+- research strategy definition — **48 %**
+- rwe generation — **48 %**
+- best practice implementation — **48 %**
+- epidemiology study execution — **48 %**
+- departmental growth facilitation — **48 %**
+- data analysis — **21 %**
+
+<!-- market-evidence -->
--- a/references/tasks.md
+++ b/references/tasks.md
@@ -0,0 +1,43 @@
+# Tasks & work activities — epidemiologist
+
+Source: O*NET 30.3, occupation 19-1041.00 (Epidemiologists).
+
+## Task statements
+
+- **[Core]** Monitor and report incidents of infectious diseases to local and state health agencies.
+- **[Core]** Communicate research findings on various types of diseases to health practitioners, policy makers, and the public.
+- **[Core]** Educate healthcare workers, patients, and the public about infectious and communicable diseases, including disease transmission and prevention.
+- **[Core]** Write articles for publication in professional journals.
+- **[Core]** Write grant applications to fund epidemiologic research.
+- **[Core]** Oversee public health programs, including statistical analysis, health care planning, surveillance systems, and public health improvement.
+- **[Core]** Investigate diseases or parasites to determine cause and risk factors, progress, life cycle, or mode of transmission.
+- **[Core]** Plan and direct studies to investigate human or animal disease, preventive methods, and treatments for disease.
+- **[Core]** Plan, administer and evaluate health safety standards and programs to improve public health, conferring with health department, industry personnel, physicians, and others.
+- **[Core]** Provide expertise in the design, management and evaluation of study protocols and health status questionnaires, sample selection, and analysis.
+- **[Core]** Conduct research to develop methodologies, instrumentation, and procedures for medical application, analyzing data and presenting findings.
+- **[Core]** Consult with and advise physicians, educators, researchers, government health officials and others regarding medical applications of sciences, such as physics, biology, and chemistry.
+- **[Core]** Supervise professional, technical, and clerical personnel.
+- **[Core]** Identify and analyze public health issues related to foodborne parasitic diseases and their impact on public policies, scientific studies, or surveys.
+- **[Supplemental]** Teach principles of medicine and medical and laboratory procedures to physicians, residents, students, and technicians.
+- **[Supplemental]** Prepare and analyze samples to study effects of drugs, gases, pesticides, or microorganisms on cell structure and tissue.
+
+## Detailed work activities
+
+- Advise others on healthcare matters.
+- Analyze biological samples.
+- Analyze health-related data.
+- Communicate with government agencies.
+- Develop methods of social or economic research.
+- Direct medical science or healthcare programs.
+- Establish standards for products, processes, or procedures.
+- Instruct college students in physical or life sciences.
+- Plan biological research.
+- Prepare proposals or grant applications to obtain project funding.
+- Prepare scientific or technical reports or presentations.
+- Present research results to others.
+- Research diseases or parasites.
+- Research topics in area of expertise.
+- Supervise scientific or technical personnel.
+- Train personnel in technical or scientific procedures.
+- Write articles, books or other original materials in area of expertise.
+- Write grant proposals.
--- a/references/tools.md
+++ b/references/tools.md
@@ -0,0 +1,60 @@
+# Tools & technology — epidemiologist
+
+Source: O*NET 30.3 'Software Skills' for 19-1041.00.
+
+| Software | Category | Hot technology |
+|---|---|---|
+| IBM SPSS Statistics | Analytical or scientific software | yes |
+| SAS | Analytical or scientific software | yes |
+| Tableau | Business intelligence and data analysis software | yes |
+| Microsoft Access | Data base user interface and query software | yes |
+| Structured query language SQL | Data base user interface and query software | yes |
+| Microsoft Outlook | Electronic mail software | yes |
+| ESRI ArcGIS software | Map creation software | yes |
+| Python | Object or component oriented development software | yes |
+| R | Object or component oriented development software | yes |
+| Microsoft Office software | Office suite software | yes |
+| Microsoft PowerPoint | Presentation software | yes |
+| Microsoft Excel | Spreadsheet software | yes |
+| Facebook | Web page creation and editing software | yes |
+| Microsoft Word | Word processing software | yes |
+| Centers for Disease Control and Prevention Epi Info | Analytical or scientific software |  |
+| Circle Systems Stat/Transfer | Analytical or scientific software |  |
+| Cytel Egret | Analytical or scientific software |  |
+| Data visualization software | Analytical or scientific software |  |
+| Disease Mapping and Analysis Program DMAP | Analytical or scientific software |  |
+| Epicenter Software Epilog | Analytical or scientific software |  |
+| EpiData Analysis | Analytical or scientific software |  |
+| Expert Health Data Programming Vitalnet | Analytical or scientific software |  |
+| GeoDa | Analytical or scientific software |  |
+| HiroSoft EPICURE | Analytical or scientific software |  |
+| Meta-analysis with interactive explanations MIX | Analytical or scientific software |  |
+| National Institute for Occupational Safety and Health NIOSH Life Table Analysis System | Analytical or scientific software |  |
+| Pan American Health Organization SIGEpi | Analytical or scientific software |  |
+| RTI International SUDAAN | Analytical or scientific software |  |
+| SaTScan | Analytical or scientific software |  |
+| Signal detection software | Analytical or scientific software |  |
+| StataCorp Stata | Analytical or scientific software |  |
+| Statistical processing software | Analytical or scientific software |  |
+| Statistical software | Analytical or scientific software |  |
+| TerraSeer ClusterSeer | Analytical or scientific software |  |
+| World Health Organization HealthMapper | Analytical or scientific software |  |
+| Centers for Disease Control and Prevention CDC WONDER | Data base user interface and query software |  |
+| Database software | Data base user interface and query software |  |
+| Esri ArcGIS | Geographic information system |  |
+| ESRI ArcInfo | Geographic information system |  |
+| ESRI ArcView | Geographic information system |  |
+| Geographic information system GIS software | Geographic information system |  |
+| Web browser software | Internet browser software |  |
+
+<!-- market-evidence -->
+
+## Market evidence (job-ad analysis, 62 ads, as of 2026-07-11)
+
+Share of analyzed job ads mentioning the item (threshold ≥ 20 %). Source: JSearch/Adzuna APIs.
+
+### Tools
+
+- SAS — **24 %**
+
+<!-- market-evidence -->